HomeForumsAllegroLayout ForumsHow-To and Troubleshooting ForumProblem layouting very large networks

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    johpfe
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    Dear AllegroViva Team,

    I’m having problems applying layout to a very large network (21000 nodes, 116000 edges). When I apply the layout the calculation starts but after just a couple of iterations it stops and the network disappears from the view. I’m using Cytoscape 3.4 on windows with a radeon RFuryX (fiji) graphics card. This happens with various settings and algrorithms – sometimes a bit earlier sometimes a bit later.
    A special caracteristic of the network is that it has lots of multiple edges, some 1000-fold. When I simplify the network so it contains only single edges it works at first – but eventually the same thing happens.
    I can provide the network to you for testing purposes.

    Best regards,
    Johannes

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